Connect Seqera to your AI agent
Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.
We set up the connection using your own Seqera account, with keys you control, and keep it running. Your agent picks it up and starts doing the work.
What your agent can do in Seqera
Each one is a real action the agent can take on its own, the same things a person clicking around Seqera could do. Read-only by default; write actions are confirmed against your policy.
- Create Wave Container Tool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe, or package specific…
- Get Organization Details Tool to retrieve detailed information about a specific organization.
- Get Service Info Tool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.
- Get User Info Tool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.
- Get Wave Build Logs Tool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.
- Get Wave Build Status Tool to retrieve the status of a Wave container build by build ID. Use when you need to check if a container build is completed and whether it succeeded.
- Inspect Wave Container Tool to inspect container image metadata via Wave. Use when you need registry, manifest, digest, configuration, and OCI compatibility information about a container image.
- List Action Event Types Tool to list supported action event types. Use when you need to discover available triggers for pipelines, optionally filtered by workspace.
- List Compute Environments Tool to retrieve a list of compute environments. Use when you need to page, sort, or filter compute environments accessible to your account.
- List Organizations Tool to list all organizations. Use after authentication to retrieve accessible Seqera organizations.
- List Pipelines Tool to list all pipelines accessible to the authenticated user. Use when you need to browse pipelines with optional pagination, sorting, or search filters.
- List Workflows Tool to list workflows. Use when you need to retrieve workflows filtered by workspace and paginated.
- Validate Action Name Tool to validate action name. Use when you need to confirm if an action name is valid and available before creating an action. Returns validation status with details.
- Validate Pipeline Name Tool to validate a pipeline name. Use when you need to check if a given pipeline name is valid and available before creating or updating one.
How we connect it
- 1
Connect your account
You create a key in Seqera, a key you create and control, and paste it in once. It lives in a secrets store on your server, not with us.
- 2
Set the guardrails
Read-only by default. You choose which write actions the agent may take, and anything outside that policy gets confirmed with you first.
- 3
We keep it running
Health checks on every connection, updates handled for you, and we watch the first week of activity to make sure the work lands.
FAQ
Seqera questions, answered.
Ready to put Seqera to work?
Tell us what your team runs on. We set up the connection, secure it, and your agent takes it from there.
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